- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DT- DT- DG- DA- DT- DG: 5'-D(TP*TP*GP*AP*TP*GP)-3'(Non-covalent)
- 9 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)
ZN.3: 5 residues within 4Å:- Chain A: H.67, H.69
- Chain C: H.137
- Ligands: DT-DT-DG-DA-DT-DG.1, DT-DT-DG-DA-DT-DG.1
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain C- Metal complexes: A:H.67, A:H.69, C:H.137
ZN.4: 2 residues within 4Å:- Chain A: P.114
- Chain B: C.21
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:P.114, H2O.6, H2O.6, H2O.6, H2O.6
ZN.5: 2 residues within 4Å:- Chain A: D.45, D.49
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.45, A:D.45, A:D.49, A:D.49
ZN.6: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)ZN.7: 1 residues within 4Å:- Ligands: DT-DT-DG-DA-DT-DG.1
No protein-ligand interaction detected (PLIP)ZN.8: 5 residues within 4Å:- Chain A: H.137
- Chain C: H.67, H.69
- Ligands: DT-DT-DG-DA-DT-DG.2, DT-DT-DG-DA-DT-DG.2
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain A- Metal complexes: C:H.67, C:H.69, A:H.137
ZN.9: 1 residues within 4Å:- Chain C: D.45
6 PLIP interactions:1 interactions with chain C, 5 Ligand-Water interactions- Metal complexes: C:D.45, H2O.14, H2O.14, H2O.14, H2O.14, H2O.14
ZN.10: 3 residues within 4Å:- Chain C: P.114
- Chain D: C.21, A.22
5 PLIP interactions:1 interactions with chain C, 4 Ligand-Water interactions- Metal complexes: C:P.114, H2O.18, H2O.18, H2O.18, H2O.18
ZN.11: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hickman, A.B. et al., DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans. Embo J. (2010)
- Release Date
- 2010-10-13
- Peptides
- TRANSPOSASE: AC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DT- DT- DG- DA- DT- DG: 5'-D(TP*TP*GP*AP*TP*GP)-3'(Non-covalent)
- 9 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hickman, A.B. et al., DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans. Embo J. (2010)
- Release Date
- 2010-10-13
- Peptides
- TRANSPOSASE: AC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
D