- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CU: COPPER (II) ION(Non-covalent)
- 3 x NO2: NITRITE ION(Non-covalent)
NO2.3: 8 residues within 4Å:- Chain A: H.249, I.251, H.300, L.302
- Chain B: D.92, H.94, H.129
- Ligands: CU.9
No protein-ligand interaction detected (PLIP)NO2.14: 7 residues within 4Å:- Chain A: D.92, H.94, H.129
- Chain C: H.249, I.251, H.300
- Ligands: CU.2
No protein-ligand interaction detected (PLIP)NO2.17: 7 residues within 4Å:- Chain B: H.249, I.251, H.300
- Chain C: D.92, H.94, H.129
- Ligands: CU.16
No protein-ligand interaction detected (PLIP)- 10 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: H.22, E.23, Q.24, H.165
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.24
- Salt bridges: A:H.165
SO4.5: 2 residues within 4Å:- Chain A: V.14, A.15
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:A.15
SO4.6: 3 residues within 4Å:- Chain A: I.328, K.329, A.330
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:A.330
SO4.7: 1 residues within 4Å:- Chain A: R.270
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.270
SO4.10: 6 residues within 4Å:- Chain A: R.247, N.301, E.304
- Chain B: N.243, R.244, D.245
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:D.245, A:N.301
- Salt bridges: B:R.244, A:R.247
SO4.11: 3 residues within 4Å:- Chain B: L.13, V.14, A.15
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:A.15
SO4.12: 4 residues within 4Å:- Chain B: H.22, E.23, Q.24, H.165
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Q.24, B:A.25
- Salt bridges: B:H.165
SO4.13: 1 residues within 4Å:- Chain B: R.270
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:R.270
SO4.18: 5 residues within 4Å:- Chain C: H.22, E.23, Q.24, A.25, H.165
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:H.22, C:Q.24, C:A.25
- Salt bridges: C:H.165
SO4.19: 2 residues within 4Å:- Chain C: V.14, A.15
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:A.15
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leferink, N.G.H. et al., Proton-Coupled Electron Transfer in the Catalytic Cycle of Alcaligenes Xylosoxidans Copper-Dependent Nitrite Reductase. Biochemistry (2011)
- Release Date
- 2011-05-18
- Peptides
- DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
CC
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x CU: COPPER (II) ION(Non-covalent)
- 3 x NO2: NITRITE ION(Non-covalent)
- 10 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leferink, N.G.H. et al., Proton-Coupled Electron Transfer in the Catalytic Cycle of Alcaligenes Xylosoxidans Copper-Dependent Nitrite Reductase. Biochemistry (2011)
- Release Date
- 2011-05-18
- Peptides
- DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
CC
F