SMTL ID : 2xz4.2 (1 other biounit)

Crystal structure of the LFZ ectodomain of the peptidoglycan recognition protein LF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: E.19, K.56, Q.59, A.60, K.64 Ligands: EDO.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.19, A:E.19, A:K.56, A:Q.59 EDO.2: 4 residues within 4Å: Chain A: Y.53, K.56, T.57 Ligands: EDO.1 No protein-ligand interaction detected (PLIP) EDO.3: 6 residues within 4Å: Chain A: H.38, H.39, A.41, Y.73, H.147, S.155 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.73, A:H.147, A:S.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Basbous, N. et al., The Drosophila Peptidoglycan-Recognition Protein Lf Interacts with Peptidoglycan-Recognition Protein Lc to Downregulate the Imd Pathway. Embo Rep. (2011)

Release Date

2011-04-13

Peptides

PEPTIDOGLYCAN-RECOGNITION PROTEIN LF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PEPTIDOGLYCAN-RECOGNITION PROTEIN LF

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