- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x Z06: (3-acetamido-5-carboxy-phenyl)-trihydroxy-boron(Covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 3 residues within 4Å:- Chain A: T.266, Q.269, K.286
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.269
- Water bridges: A:K.158, A:K.286
- Salt bridges: A:K.286
SO4.19: 3 residues within 4Å:- Chain B: T.266, Q.269, K.286
3 PLIP interactions:3 interactions with chain B- Water bridges: B:K.286, B:K.286
- Salt bridges: B:K.286
- 25 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 1 residues within 4Å:- Chain A: R.232
Ligand excluded by PLIPCL.4: 2 residues within 4Å:- Chain A: V.238, K.239
Ligand excluded by PLIPCL.5: 2 residues within 4Å:- Chain A: R.330, K.336
Ligand excluded by PLIPCL.6: 3 residues within 4Å:- Chain A: N.462, K.463, S.464
Ligand excluded by PLIPCL.7: 3 residues within 4Å:- Chain A: E.214, N.217, Y.218
Ligand excluded by PLIPCL.8: 6 residues within 4Å:- Chain A: Y.10, S.11, D.12, I.97, D.98, Q.99
Ligand excluded by PLIPCL.9: 2 residues within 4Å:- Chain A: A.295, D.296
Ligand excluded by PLIPCL.10: 3 residues within 4Å:- Chain A: S.478, D.479, A.480
Ligand excluded by PLIPCL.11: 3 residues within 4Å:- Chain A: S.429, E.430, K.438
Ligand excluded by PLIPCL.12: 2 residues within 4Å:- Chain A: V.427, K.428
Ligand excluded by PLIPCL.13: 5 residues within 4Å:- Chain A: G.246, Y.247, E.248, V.265, Q.269
Ligand excluded by PLIPCL.14: 4 residues within 4Å:- Chain A: E.49, H.287, V.288, I.289
Ligand excluded by PLIPCL.17: 3 residues within 4Å:- Chain A: T.334, S.337
- Chain B: S.337
Ligand excluded by PLIPCL.20: 1 residues within 4Å:- Chain B: R.232
Ligand excluded by PLIPCL.21: 2 residues within 4Å:- Chain B: V.238, K.239
Ligand excluded by PLIPCL.22: 3 residues within 4Å:- Chain B: N.462, K.463, S.464
Ligand excluded by PLIPCL.23: 3 residues within 4Å:- Chain B: E.214, N.217, Y.218
Ligand excluded by PLIPCL.24: 2 residues within 4Å:- Chain B: A.295, D.296
Ligand excluded by PLIPCL.25: 3 residues within 4Å:- Chain B: S.478, D.479, A.480
Ligand excluded by PLIPCL.26: 2 residues within 4Å:- Chain B: S.429, E.430
Ligand excluded by PLIPCL.27: 2 residues within 4Å:- Chain B: V.427, K.428
Ligand excluded by PLIPCL.28: 5 residues within 4Å:- Chain B: G.246, Y.247, E.248, V.265, Q.269
Ligand excluded by PLIPCL.29: 2 residues within 4Å:- Chain B: S.312, K.313
Ligand excluded by PLIPCL.30: 6 residues within 4Å:- Chain B: Y.10, S.11, D.12, I.97, D.98, Q.99
Ligand excluded by PLIPCL.31: 4 residues within 4Å:- Chain B: Y.41, F.44, T.45, N.152
Ligand excluded by PLIP- 3 x NA: SODIUM ION(Non-functional Binders)
NA.15: 5 residues within 4Å:- Chain A: S.219, T.355, G.356, T.357
- Ligands: Z06.1
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.219, A:T.355, A:T.357
- Water bridges: A:T.357
NA.32: 4 residues within 4Å:- Chain B: T.355, G.356, T.357
- Ligands: Z06.18
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.219, B:S.219, B:T.355, B:T.357
NA.33: 2 residues within 4Å:- Chain B: Y.114, D.117
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.117
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Contreras-Martel, C. et al., Structure-Guided Design of Cell Wall Biosynthesis Inhibitors that Overcome Beta-Lactam Resistance in Staphylococcus Aureus (Mrsa). Acs Chem.Biol. (2011)
- Release Date
- 2011-08-03
- Peptides
- PENICILLIN-BINDING PROTEIN 1B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x Z06: (3-acetamido-5-carboxy-phenyl)-trihydroxy-boron(Covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 25 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x NA: SODIUM ION(Non-functional Binders)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Contreras-Martel, C. et al., Structure-Guided Design of Cell Wall Biosynthesis Inhibitors that Overcome Beta-Lactam Resistance in Staphylococcus Aureus (Mrsa). Acs Chem.Biol. (2011)
- Release Date
- 2011-08-03
- Peptides
- PENICILLIN-BINDING PROTEIN 1B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B