SMTL ID : 2yfz.1

CBM62 FROM CLOSTRIDIUM THERMOCELLUM XYL5A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x BGC- BGC- XYS- GAL- BGC: beta-D-galactopyranose-(1-2)-alpha-D-xylopyranose-(1-6)-[beta-D-glucopyranose-(1-4)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC-XYS-GAL-BGC.1: 9 residues within 4Å: Chain A: W.18, D.38, R.67, G.69, Y.70, Q.72, R.73, G.126, N.128 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.73, A:G.126, A:G.126, A:D.38, A:R.67, A:R.67, A:Y.70, A:R.73, A:R.73, A:N.128, A:R.73 Water bridges: A:W.18, A:N.128

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: K.27, D.30, D.32, T.35, A.132, E.133 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:K.27, A:D.30, A:D.32, A:T.35, A:E.133

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: L.7, T.8, G.9, V.11, F.29, L.49 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montanier, C.Y. et al., A Novel, Noncatalytic Carbohydrate-Binding Module Displays Specificity for Galactose-Containing Polysaccharides Through Calcium-Mediated Oligomerization. J.Biol.Chem. (2011)

Release Date

2011-05-18

Peptides

CARBOHYDRATE BINDING FAMILY 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CARBOHYDRATE BINDING FAMILY 6

Related Entries With Identical Sequence