SMTL ID : 2yr4.1

Crystal structure of L-phenylalanine oxiase from Psuedomonas sp. P-501

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 37 residues within 4Å: Chain A: G.1, V.62, G.63, G.65, A.66, G.67, Y.93, E.94, A.95, D.96, G.118, R.119, V.120, V.139, G.140, A.141, R.143, F.144, E.372, R.373, V.374, A.409, V.410, P.411, Q.414, I.418, S.476, K.478, Y.536, G.615, G.616, S.651, D.652, G.659, W.660, L.661, A.664 27 PLIP interactions: 27 interactions with chain A Hydrogen bonds: A:G.1, A:G.64, A:A.66, A:G.67, A:A.95, A:G.118, A:R.119, A:A.141, A:R.143, A:R.143, A:V.374, A:V.374, A:D.652, A:L.661 Water bridges: A:G.65, A:G.68, A:E.94, A:E.94, A:V.120, A:V.120, A:R.373, A:Q.414, A:Q.414, A:Q.414, A:E.662 Salt bridges: A:R.119, A:R.119 FAD.3: 38 residues within 4Å: Chain B: G.1, V.62, G.63, G.64, G.65, A.66, G.67, Y.93, E.94, A.95, D.96, G.118, R.119, V.120, V.139, G.140, A.141, R.143, F.144, E.372, R.373, V.374, A.409, V.410, P.411, Q.414, I.418, S.476, Y.536, G.615, G.616, F.617, S.651, D.652, G.659, W.660, L.661, A.664 30 PLIP interactions: 30 interactions with chain B Hydrophobic interactions: B:F.617 Hydrogen bonds: B:G.1, B:G.64, B:A.66, B:G.67, B:A.95, B:D.96, B:R.119, B:A.141, B:R.143, B:R.143, B:V.374, B:V.374, B:D.652, B:D.652, B:L.661 Water bridges: B:G.64, B:G.65, B:G.68, B:E.94, B:E.94, B:D.96, B:V.120, B:V.120, B:R.143, B:R.373, B:Y.536, B:E.662 Salt bridges: B:R.119, B:R.119

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain B: K.108, A.109, I.110 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:A.109, B:I.110 Water bridges: B:R.104, B:K.108 Salt bridges: B:K.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ida, K. et al., Structural basis of proteolytic activation of L-phenylalanine oxidase from Pseudomonas sp. P-501. J.Biol.Chem. (2008)

Release Date

2008-04-15

Peptides

Pro-enzyme of L-phenylalanine oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Pro-enzyme of L-phenylalanine oxidase

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