SMTL ID : 2yrr.1

hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 16 residues within 4Å: Chain A: S.60, G.61, S.62, F.85, R.88, V.131, G.133, T.135, D.160, V.162, T.163, Q.185, K.186 Chain B: Y.229, H.231, T.232 14 PLIP interactions: 12 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:F.85, A:V.131, A:V.162, A:V.162, A:K.186 Hydrogen bonds: A:G.61, A:S.62, A:T.135, A:Q.185, A:K.186, B:T.232, B:T.232 Salt bridges: A:K.186 pi-Stacking: A:F.85 PLP.2: 15 residues within 4Å: Chain A: Y.229, H.231, T.232 Chain B: S.60, G.61, S.62, M.65, F.85, V.131, G.133, T.135, D.160, V.162, Q.185, K.186 17 PLIP interactions: 13 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:F.85, B:V.131, B:V.162, B:V.162, B:K.186 Hydrogen bonds: B:G.61, B:S.62, B:T.135, B:T.135, B:Q.185, B:K.186, A:Y.229, A:T.232, A:T.232, A:T.232 Salt bridges: B:K.186 pi-Stacking: B:F.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyahara, I. et al., hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8. To be Published

Release Date

2008-04-15

Peptides

Aminotransferase, class V: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Aminotransferase, class V

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