SMTL ID : 2ys6.1

Crystal structure of GAR synthetase from Geobacillus kaustophilus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

monomer

Ligands

1 x GLY: GLYCINE(Non-covalent)

GLY.1: 10 residues within 4Å: Chain A: D.233, K.235, G.247, Y.290, N.306, R.308, G.310, D.311, P.312, E.313 8 PLIP interactions: 6 interactions with chain A, 2 Ligand-Ligand interactions Hydrogen bonds: A:D.233, A:Y.290, A:D.311, A:D.311, G.1 Water bridges: A:R.397, G.1 Salt bridges: A:R.308

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.2: 9 residues within 4Å: Chain A: K.124, K.164, E.207, L.209, E.213, K.235, N.245, M.294, I.303 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.207, A:L.209, A:E.213, A:N.245 Water bridges: A:K.124 Salt bridges: A:K.124, A:K.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sampei, G. et al., Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria. J.Biochem. (2010)

Release Date

2007-10-09

Peptides

Phosphoribosylglycinamide synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoribosylglycinamide synthetase

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