- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
GDP.2: 18 residues within 4Å:- Chain A: V.88, E.129, N.180, E.189, F.190, V.191, K.194, V.211, L.212, G.213, N.214, A.217, R.219, V.253, F.295, R.297, E.300, V.301
25 PLIP interactions:25 interactions with chain A- Hydrogen bonds: A:E.129, A:N.180, A:E.189, A:V.191, A:K.194, A:G.213, A:N.214, A:R.297, A:R.297, A:V.301
- Water bridges: A:E.129, A:E.129, A:E.129, A:R.186, A:R.186, A:E.189, A:K.194, A:R.219, A:R.219, A:R.297, A:R.297, A:V.301
- Salt bridges: A:R.219, A:R.297, A:R.297
GDP.4: 17 residues within 4Å:- Chain D: V.88, E.129, N.180, E.189, F.190, V.191, K.194, V.211, L.212, G.213, N.214, A.217, R.219, V.253, F.295, R.297, E.300
24 PLIP interactions:24 interactions with chain D- Hydrogen bonds: D:E.129, D:N.180, D:E.189, D:V.191, D:K.194, D:G.213, D:N.214, D:R.297, D:R.297, D:V.301
- Water bridges: D:E.129, D:E.129, D:E.129, D:R.186, D:R.186, D:E.189, D:E.189, D:K.194, D:R.219, D:R.297, D:V.301
- Salt bridges: D:R.219, D:R.297, D:R.297
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Niwa, H. et al., Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5. To be Published
- Release Date
- 2007-11-13
- Peptides
- GDP-D-mannose dehydratase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Niwa, H. et al., Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5. To be Published
- Release Date
- 2007-11-13
- Peptides
- GDP-D-mannose dehydratase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D