- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.63 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x BDI: 2-BUTYL-5,6-DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE-4,7-DIONE(Non-covalent)
BDI.2: 12 residues within 4Å:- Chain A: D.102, Y.106, D.156, C.158, I.201, Q.203, G.229, G.230, A.232, M.260, G.261
- Ligands: GOL.4
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:Y.106, A:Y.106
- Hydrogen bonds: A:Q.203, A:G.230
- Water bridges: A:S.103, A:G.105, A:L.231, A:M.260
- pi-Stacking: A:Y.106
BDI.13: 12 residues within 4Å:- Chain B: D.102, Y.106, D.156, C.158, I.201, Q.203, G.229, G.230, A.232, M.260, G.261
- Ligands: GOL.15
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:Y.106, B:Y.106
- Hydrogen bonds: B:Q.203, B:G.230
- Water bridges: B:S.103, B:G.105, B:L.231, B:M.260
- pi-Stacking: B:Y.106
- 18 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 6 residues within 4Å:- Chain A: P.56, E.57, G.94, W.95, D.96, R.97
Ligand excluded by PLIPGOL.4: 10 residues within 4Å:- Chain A: V.45, L.68, D.102, Q.107, Y.258, M.260, G.261, D.280, C.281
- Ligands: BDI.2
Ligand excluded by PLIPGOL.5: 9 residues within 4Å:- Chain A: H.145, G.148, S.149, D.150, E.191, Q.192, N.195, A.196
- Ligands: GOL.7
Ligand excluded by PLIPGOL.6: 6 residues within 4Å:- Chain A: E.317, K.360, F.373, D.376, F.377, R.380
Ligand excluded by PLIPGOL.7: 6 residues within 4Å:- Chain A: R.34, G.87, G.88, L.147, G.148
- Ligands: GOL.5
Ligand excluded by PLIPGOL.8: 6 residues within 4Å:- Chain A: A.61, T.62, H.319, C.320, A.352, Q.356
Ligand excluded by PLIPGOL.9: 5 residues within 4Å:- Chain A: M.176, K.180, A.217, E.220, I.221
Ligand excluded by PLIPGOL.10: 2 residues within 4Å:- Chain A: K.24, E.273
Ligand excluded by PLIPGOL.11: 5 residues within 4Å:- Chain A: P.249, M.250, L.251, P.252, D.253
Ligand excluded by PLIPGOL.14: 6 residues within 4Å:- Chain B: P.56, E.57, G.94, W.95, D.96, R.97
Ligand excluded by PLIPGOL.15: 10 residues within 4Å:- Chain B: V.45, L.68, D.102, Q.107, Y.258, M.260, G.261, D.280, C.281
- Ligands: BDI.13
Ligand excluded by PLIPGOL.16: 9 residues within 4Å:- Chain B: H.145, G.148, S.149, D.150, E.191, Q.192, N.195, A.196
- Ligands: GOL.18
Ligand excluded by PLIPGOL.17: 6 residues within 4Å:- Chain B: E.317, K.360, F.373, D.376, F.377, R.380
Ligand excluded by PLIPGOL.18: 6 residues within 4Å:- Chain B: R.34, G.87, G.88, L.147, G.148
- Ligands: GOL.16
Ligand excluded by PLIPGOL.19: 6 residues within 4Å:- Chain B: A.61, T.62, H.319, C.320, A.352, Q.356
Ligand excluded by PLIPGOL.20: 5 residues within 4Å:- Chain B: M.176, K.180, A.217, E.220, I.221
Ligand excluded by PLIPGOL.21: 2 residues within 4Å:- Chain B: K.24, E.273
Ligand excluded by PLIPGOL.22: 5 residues within 4Å:- Chain B: P.249, M.250, L.251, P.252, D.253
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tidten, N. et al., Glutamate versus Glutamine Exchange Swaps Substrate Selectivity in tRNA-Guanine Transglycosylase: Insight into the Regulation of Substrate Selectivity by Kinetic and Crystallographic Studies. J.Mol.Biol. (2007)
- Release Date
- 2007-11-06
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.63 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x BDI: 2-BUTYL-5,6-DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE-4,7-DIONE(Non-covalent)
- 18 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tidten, N. et al., Glutamate versus Glutamine Exchange Swaps Substrate Selectivity in tRNA-Guanine Transglycosylase: Insight into the Regulation of Substrate Selectivity by Kinetic and Crystallographic Studies. J.Mol.Biol. (2007)
- Release Date
- 2007-11-06
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A