- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.63 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x PRF: 7-DEAZA-7-AMINOMETHYL-GUANINE(Non-covalent)
PRF.2: 13 residues within 4Å:- Chain A: D.102, S.103, Y.106, D.156, C.158, I.201, Q.203, G.229, G.230, L.231, A.232, M.260
- Ligands: GOL.5
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:M.260
- Hydrogen bonds: A:D.102, A:S.103, A:Y.106, A:Q.203, A:G.230, A:L.231, A:L.231
- Water bridges: A:G.104
- Salt bridges: A:D.102, A:D.156
- pi-Stacking: A:Y.106
PRF.12: 13 residues within 4Å:- Chain B: D.102, S.103, Y.106, D.156, C.158, I.201, Q.203, G.229, G.230, L.231, A.232, M.260
- Ligands: GOL.15
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:M.260
- Hydrogen bonds: B:D.102, B:S.103, B:Y.106, B:Q.203, B:G.230, B:L.231, B:L.231
- Water bridges: B:G.104
- Salt bridges: B:D.102, B:D.156
- pi-Stacking: B:Y.106
- 16 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 7 residues within 4Å:- Chain A: A.19, T.27, G.28, T.29, R.38, R.362, S.366
Ligand excluded by PLIPGOL.4: 7 residues within 4Å:- Chain A: P.56, E.57, R.60, G.94, W.95, D.96, R.97
Ligand excluded by PLIPGOL.5: 9 residues within 4Å:- Chain A: V.45, L.68, D.102, Q.107, G.261, D.280, C.281, V.282
- Ligands: PRF.2
Ligand excluded by PLIPGOL.6: 7 residues within 4Å:- Chain A: R.34, H.145, G.148, S.149, D.150, E.191, Q.192
Ligand excluded by PLIPGOL.7: 6 residues within 4Å:- Chain A: A.61, T.62, H.319, C.320, A.352, Q.356
Ligand excluded by PLIPGOL.8: 3 residues within 4Å:- Chain A: N.304, A.305, R.306
Ligand excluded by PLIPGOL.9: 4 residues within 4Å:- Chain A: F.16, S.17, I.18, D.254
Ligand excluded by PLIPGOL.10: 5 residues within 4Å:- Chain A: E.22, A.25, E.273, F.370, S.371
Ligand excluded by PLIPGOL.13: 7 residues within 4Å:- Chain B: A.19, T.27, G.28, T.29, R.38, R.362, S.366
Ligand excluded by PLIPGOL.14: 7 residues within 4Å:- Chain B: P.56, E.57, R.60, G.94, W.95, D.96, R.97
Ligand excluded by PLIPGOL.15: 9 residues within 4Å:- Chain B: V.45, L.68, D.102, Q.107, G.261, D.280, C.281, V.282
- Ligands: PRF.12
Ligand excluded by PLIPGOL.16: 7 residues within 4Å:- Chain B: R.34, H.145, G.148, S.149, D.150, E.191, Q.192
Ligand excluded by PLIPGOL.17: 6 residues within 4Å:- Chain B: A.61, T.62, H.319, C.320, A.352, Q.356
Ligand excluded by PLIPGOL.18: 3 residues within 4Å:- Chain B: N.304, A.305, R.306
Ligand excluded by PLIPGOL.19: 4 residues within 4Å:- Chain B: F.16, S.17, I.18, D.254
Ligand excluded by PLIPGOL.20: 5 residues within 4Å:- Chain B: E.22, A.25, E.273, F.370, S.371
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tidten, N. et al., Glutamate versus Glutamine Exchange Swaps Substrate Selectivity in tRNA-Guanine Transglycosylase: Insight into the Regulation of Substrate Selectivity by Kinetic and Crystallographic Studies. J.Mol.Biol. (2007)
- Release Date
- 2007-11-06
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.63 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x PRF: 7-DEAZA-7-AMINOMETHYL-GUANINE(Non-covalent)
- 16 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tidten, N. et al., Glutamate versus Glutamine Exchange Swaps Substrate Selectivity in tRNA-Guanine Transglycosylase: Insight into the Regulation of Substrate Selectivity by Kinetic and Crystallographic Studies. J.Mol.Biol. (2007)
- Release Date
- 2007-11-06
- Peptides
- Queuine tRNA-ribosyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A