SMTL ID : 2z82.1

Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: P.361, K.387, N.388 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN.2: 7 residues within 4Å: Chain A: S.369, S.395, F.414, N.416, S.418, D.437, R.460 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.460, A:R.460

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain A: P.120, N.121 No protein-ligand interaction detected (PLIP)

1 x PDJ: (2R)-3-{[(2R)-2-AMINO-3-HYDROXYPROPYL]THIO}PROPANE-1,2-DIYL DIHEXADECANOATE(Non-covalent)

PDJ.4: 19 residues within 4Å: Chain A: L.235, F.240, L.244, V.256, F.258, L.263, V.286, L.291, I.293, F.296, L.309, V.317, S.320, K.321, V.322, F.323, L.324, P.326, F.329 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.235, A:F.240, A:L.244, A:V.256, A:F.258, A:F.258, A:F.258, A:L.263, A:V.286, A:L.291, A:I.293, A:L.309, A:L.309, A:V.317, A:F.323 Hydrogen bonds: A:F.323, A:L.324

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, M.S. et al., Crystal Structure of the TLR1-TLR2 Heterodimer Induced by Binding of a Tri-Acylated Lipopeptide. Cell(Cambridge,Mass.) (2007)

Release Date

2007-10-02

Peptides

Toll-like receptor 2, Variable lymphocyte receptor B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Toll-like receptor 2, Variable lymphocyte receptor B

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