SMTL ID : 2z9y.1

Crystal structure of CERT START domain in complex with C10-diacylglycerol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x DDR: (2S)-3-hydroxypropane-1,2-diyl didecanoate(Non-covalent)

DDR.1: 16 residues within 4Å: Chain A: F.93, R.99, W.102, E.103, Q.124, H.126, R.135, Y.139, N.161, I.180, V.182, Y.210, V.214, E.232, Y.233, F.236 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:H.126, A:R.135, A:I.180, A:V.214, A:E.232, A:Y.233, A:F.236, A:F.236 Hydrogen bonds: A:F.93, A:N.161 Water bridges: A:S.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kudo, N. et al., Structural basis for specific lipid recognition by CERT responsible for nonvesicular trafficking of ceramide. Proc.Natl.Acad.Sci.Usa (2008)

Release Date

2008-02-12

Peptides

Lipid-transfer protein CERT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lipid-transfer protein CERT

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