SMTL ID : 2zas.1

Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with 4-alpha-cumylphenol, a bisphenol A derivative

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x 1OH: 4-(1-methyl-1-phenylethyl)phenol(Non-covalent)

1OH.1: 13 residues within 4Å: Chain A: L.53, L.56, A.57, E.60, M.91, L.94, R.101, Y.111, L.130, N.131, I.134, A.216, F.220 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.53, A:L.56, A:A.57, A:L.94, A:Y.111, A:L.130, A:I.134, A:A.216, A:F.220 Hydrogen bonds: A:E.60, A:R.101 Water bridges: A:R.101 pi-Stacking: A:Y.111 1OH.3: 13 residues within 4Å: Chain B: L.53, L.56, A.57, E.60, M.91, L.94, R.101, Y.111, L.130, N.131, I.134, A.216, F.220 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.53, B:L.56, B:A.57, B:L.94, B:Y.111, B:L.130, B:I.134, B:A.216, B:F.220 Hydrogen bonds: B:E.60, B:R.101 Water bridges: B:R.101 pi-Stacking: B:Y.111

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: K.175, E.182 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.175, A:K.175 Water bridges: A:D.178, A:D.178, A:D.178, A:E.182 GOL.4: 2 residues within 4Å: Chain B: K.175, E.182 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.175, B:K.175 Water bridges: B:D.178, B:D.178, B:E.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsushima, A. et al., ERRgamma tethers strongly bisphenol A and 4-alpha-cumylphenol in an induced-fit manner. Biochem.Biophys.Res.Commun. (2008)

Release Date

2008-10-07

Peptides

Estrogen-related receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Estrogen-related receptor gamma

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