SMTL ID : 2zb0.1

Crystal structure of P38 in complex with biphenyl amide inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x GK3: N-(3-cyanophenyl)-2'-methyl-5'-(5-methyl-1,3,4-oxadiazol-2-yl)-4-biphenylcarboxamide(Non-covalent)

GK3.1: 15 residues within 4Å: Chain A: V.30, V.38, A.51, K.53, E.71, L.75, I.84, T.106, H.107, L.108, M.109, G.110, D.168, F.169, L.171 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.30, A:V.30, A:V.38, A:A.51, A:K.53, A:L.75, A:T.106, A:L.108, A:F.169, A:L.171 Hydrogen bonds: A:M.109, A:G.110, A:D.168, A:D.168, A:F.169

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: Y.182, R.220, T.221 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.221, A:T.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Angell, R.M. et al., Biphenyl amide p38 kinase inhibitors 1: Discovery and binding mode. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-01-15

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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