SMTL ID : 2zck.1

Crystal structure of a ternary complex between PSA, a substrat-acyl intermediate and an activating antibody

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x LYS- GLY- ILE- SER- SER- GLN- TYR: KGISSQY(Non-covalent)

LYS-GLY-ILE-SER-SER-GLN-TYR.1: 25 residues within 4Å: Chain A: H.41, Y.77, L.81, F.86, L.87, S.93, Q.162, V.163, H.164, P.165, Q.166, T.184, C.185, S.186, G.187, D.188, S.189, S.204, W.205, G.206, S.207, E.208, C.210, R.215, S.217 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:F.86, A:L.87 Hydrogen bonds: A:Y.77, A:Y.77, A:L.87, A:H.164, A:Q.166, A:G.187, A:D.188, A:S.189, A:S.189, A:S.204, A:G.206, A:G.206, A:S.207, A:E.208, A:E.208, A:R.215, A:R.215

1 x NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-MAN.2: 2 residues within 4Å: Chain A: R.21, N.45 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michel, S. et al., Crystal structure of a ternary complex between human prostate-specific antigen, its substrate acyl intermediate and an activating antibody. J.Mol.Biol. (2008)

Release Date

2008-01-29

Peptides

Prostate-specific antigen: A
monoclonal antibody 8G8F5 Fab: B
monoclonal antibody 8G8F5 Fab: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

B
L

C
H

Prostate-specific antigen

monoclonal antibody 8G8F5 Fab

monoclonal antibody 8G8F5 Fab

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