SMTL ID : 2ze1.1

X-ray structure of Bace-1 in complex with compound 6g

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 411: 3-bromo-N-[4-[1-(2-carbamimidamido-2-oxo-ethyl)-5-phenyl-pyrrol-2-yl]phenyl]benzamide(Non-covalent)

411.1: 21 residues within 4Å: Chain A: Q.28, G.29, L.46, D.48, G.50, S.51, N.53, V.85, Y.87, W.92, F.124, I.126, W.131, I.134, R.144, D.244, S.245, G.246, T.247, T.248, A.351 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.46, A:V.85, A:Y.87, A:W.92, A:F.124, A:W.131, A:I.134, A:R.144 Hydrogen bonds: A:G.50, A:G.246 Salt bridges: A:D.48, A:D.244 Halogen bonds: A:S.245

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cole, D.C. et al., Acylguanidine inhibitors of beta-secretase: optimization of the pyrrole ring substituents extending into the S1 and S3 substrate binding pockets. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-12-09

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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