SMTL ID : 2zgc.1

Crystal Structure of Active Human Granzyme M

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: T.128, S.135, R.136, V.137, R.139 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.136 Water bridges: A:L.134, A:R.139, A:R.139 Salt bridges: A:R.136, A:R.139 SO4.2: 2 residues within 4Å: Chain A: R.51, H.67 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.51 Salt bridges: A:R.51, A:H.67 SO4.3: 3 residues within 4Å: Chain A: S.109, K.110, R.111 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.110 Water bridges: A:R.225 Salt bridges: A:R.111 SO4.4: 2 residues within 4Å: Chain A: R.203, V.204 2 PLIP interactions: 2 interactions with chain A Water bridges: A:V.204 Salt bridges: A:R.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, L. et al., Structural basis for proteolytic specificity of the human apoptosis-inducing granzyme M. J.Immunol. (2009)

Release Date

2009-01-27

Peptides

Granzyme M: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Granzyme M

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