SMTL ID : 2zwu.1

Crystal Structure of Camphor Soaked Ferric Cytochrome P450cam

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 25 residues within 4Å: Chain A: P.101, T.102, Q.109, R.113, V.120, L.245, L.246, G.249, G.250, T.253, V.254, L.295, V.296, D.298, R.300, Q.323, T.350, F.351, G.352, H.356, C.358, L.359, G.360, A.364 Ligands: CAM.2 19 PLIP interactions: 18 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:T.253, A:V.254, A:L.295, A:V.296, A:Q.323, A:T.350, A:F.351, A:F.351, A:A.364 Hydrogen bonds: A:T.102, A:D.298, A:Q.323 Salt bridges: A:R.113, A:R.300, A:H.356, A:H.356 pi-Stacking: A:F.351 Metal complexes: A:C.358, H2O.24

1 x CAM: CAMPHOR(Non-covalent)

CAM.2: 7 residues within 4Å: Chain A: F.88, Y.97, L.245, V.248, V.296, D.298 Ligands: HEM.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.245 Hydrogen bonds: A:Y.97

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 8 residues within 4Å: Chain A: H.22, L.23, V.24, F.25, N.50, V.51, P.52, V.55 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.23, A:N.50 Water bridges: A:V.24, A:D.26

1 x K: POTASSIUM ION(Non-covalent)

K.4: 5 residues within 4Å: Chain A: E.85, C.86, G.94, E.95, Y.97 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.85, A:G.94, A:E.95, A:Y.97, H2O.15, H2O.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sakurai, K. et al., Substrate binding induces structural changes in cytochrome P450cam. Acta Crystallogr.,Sect.F (2009)

Release Date

2009-02-17

Peptides

Camphor 5-monooxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Camphor 5-monooxygenase

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