SMTL ID : 3a25.1

Crystal structure of P. horikoshii TYW2 in complex with AdoMet

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 20 residues within 4Å: Chain A: M.130, F.131, S.132, N.135, R.139, M.155, F.156, G.158, H.161, I.177, E.178, K.179, D.180, T.183, M.205, D.206, N.207, G.222, Y.223, F.230 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.132, A:N.135, A:G.158, A:K.179, A:D.180, A:D.206, A:N.207, A:N.207 Salt bridges: A:R.139, A:H.161 pi-Stacking: A:F.156, A:F.156 pi-Cation interactions: A:H.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Umitsu, M. et al., Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-09-15

Peptides

Uncharacterized protein PH0793: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein PH0793

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