SMTL ID : 3a5g.1

Crystal structure of a hemoglobin component V from Propsilocerus akamusi (pH7.0 coordinates)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 16 residues within 4Å: Chain A: Y.35, N.42, K.45, F.46, R.69, I.70, I.73, F.74, M.94, P.97, H.98, R.101, I.103, Y.108, L.111 Ligands: CMO.2 21 PLIP interactions: 20 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:N.42, A:K.45, A:F.46, A:F.46, A:F.46, A:R.69, A:I.73, A:I.73, A:F.74, A:P.97, A:I.103, A:I.103, A:L.111 Water bridges: A:E.47, A:T.48, A:T.48 Salt bridges: A:R.69, A:R.101 pi-Stacking: A:H.98 Metal complexes: A:H.98, CMO.2

1 x CMO: CARBON MONOXIDE(Non-functional Binders)

CMO.2: 5 residues within 4Å: Chain A: F.46, I.66, R.69, I.70 Ligands: HEM.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuwada, T. et al., pH-dependent structural changes in haemoglobin component V from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera). Acta Crystallogr.,Sect.D (2010)

Release Date

2010-02-09

Peptides

Hemoglobin V: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hemoglobin V

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