SMTL ID : 3ai0.1

Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with para-nitrophenyl-beta-D-glucopyranoside

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x PNW: 4-nitrophenyl beta-D-glucopyranoside(Non-covalent)

PNW.1: 16 residues within 4Å: Chain A: Q.26, H.129, W.130, N.173, D.174, T.177, N.234, N.236, Y.318, T.319, W.355, E.383, W.425, E.432, W.433, F.441 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.318, A:Y.318 Hydrogen bonds: A:Q.26, A:Q.26, A:H.129, A:N.173, A:D.174, A:N.236 Water bridges: A:N.234, A:N.316, A:S.353, A:E.439 pi-Stacking: A:W.355

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: N.284, D.287, E.288, E.331, R.336 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.288, A:E.331, A:E.331, A:R.336

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jeng, W.-Y. et al., Structural and functional analysis of three beta-glucosidases from bacterium Clostridium cellulovorans, fungus Trichoderma reesei and termite Neotermes koshunensis. J.Struct.Biol. (2011)

Release Date

2010-08-18

Peptides

beta-glucosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

beta-glucosidase

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