- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.35 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 5 residues within 4Å:- Chain A: E.148, K.149
- Chain C: E.148, K.149
- Ligands: EDO.4
Ligand excluded by PLIPEDO.3: 7 residues within 4Å:- Chain A: P.11, L.12, Y.14, N.15, Y.16, H.32
- Ligands: EDO.6
Ligand excluded by PLIPEDO.4: 6 residues within 4Å:- Chain C: V.152
- Chain D: V.152
- Ligands: EDO.2, EDO.10, EDO.15, EDO.22
Ligand excluded by PLIPEDO.5: 4 residues within 4Å:- Chain A: K.34, H.35, T.38
- Chain C: N.177
Ligand excluded by PLIPEDO.6: 5 residues within 4Å:- Chain A: L.9, P.10, P.11, H.32
- Ligands: EDO.3
Ligand excluded by PLIPEDO.8: 5 residues within 4Å:- Chain B: P.21, Y.22, Q.174, Y.175, N.185
Ligand excluded by PLIPEDO.9: 5 residues within 4Å:- Chain B: P.11, L.12, Y.14, Y.16, H.32
Ligand excluded by PLIPEDO.10: 8 residues within 4Å:- Chain B: E.148, K.149, V.152
- Chain D: E.148, K.149, V.152
- Ligands: EDO.4, EDO.15
Ligand excluded by PLIPEDO.11: 7 residues within 4Å:- Chain B: H.35, Y.39, W.167, H.169
- Chain D: E.168, R.179
- Ligands: EDO.20
Ligand excluded by PLIPEDO.13: 4 residues within 4Å:- Chain C: P.11, L.12, Y.16, H.32
Ligand excluded by PLIPEDO.14: 6 residues within 4Å:- Chain C: Q.107, F.108, L.142, R.143
- Chain D: F.4, L.47
Ligand excluded by PLIPEDO.15: 7 residues within 4Å:- Chain B: R.67, K.149
- Chain C: R.67
- Chain D: E.148, L.153
- Ligands: EDO.4, EDO.10
Ligand excluded by PLIPEDO.16: 5 residues within 4Å:- Chain A: W.167
- Chain C: V.125, G.127, E.168, R.179
Ligand excluded by PLIPEDO.18: 6 residues within 4Å:- Chain D: P.96, G.97, G.98, W.192, D.193, E.196
Ligand excluded by PLIPEDO.19: 4 residues within 4Å:- Chain C: T.124
- Chain D: D.61, V.62, R.63
Ligand excluded by PLIPEDO.20: 7 residues within 4Å:- Chain B: Y.39, F.71, W.167
- Chain D: V.125, E.126, G.127
- Ligands: EDO.11
Ligand excluded by PLIPEDO.21: 5 residues within 4Å:- Chain D: P.11, L.12, Y.14, Y.16, H.32
Ligand excluded by PLIPEDO.22: 6 residues within 4Å:- Chain A: R.67, K.149
- Chain C: E.148, L.153
- Chain D: R.67
- Ligands: EDO.4
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakamura, T. et al., Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability. Febs J. (2011)
- Release Date
- 2011-02-02
- Peptides
- Superoxide dismutase [Mn/Fe]: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.35 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakamura, T. et al., Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability. Febs J. (2011)
- Release Date
- 2011-02-02
- Peptides
- Superoxide dismutase [Mn/Fe]: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D