SMTL ID : 3alp.1

Cell adhesion protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 3 residues within 4Å: Chain A: H.35, L.85, R.86 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.85 Hydrogen bonds: A:H.35 Salt bridges: A:H.35, A:R.86 CIT.3: 3 residues within 4Å: Chain B: V.33, H.35, R.86 4 PLIP interactions: 4 interactions with chain B Salt bridges: B:H.35, B:H.35, B:R.86, B:R.95

1 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.2: 7 residues within 4Å: Chain B: T.269, N.271, S.273, S.294, L.295, A.296, G.297 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:T.269 Hydrogen bonds: B:A.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Narita, H. et al., Crystal Structure of the cis-Dimer of Nectin-1: implications for the architecture of cell-cell junctions. J.Biol.Chem. (2011)

Release Date

2011-02-16

Peptides

Poliovirus receptor-related protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Poliovirus receptor-related protein 1

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