- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 10 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.2: 1 residues within 4Å:- Chain A: Q.116
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.116, A:Y.136
PEG.3: 3 residues within 4Å:- Chain A: S.10, D.12, K.31
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.12, A:D.12, A:K.31
- Water bridges: A:S.10
PEG.4: 6 residues within 4Å:- Chain A: K.18, L.82, D.86, K.89, N.91
- Ligands: PEG.5
2 PLIP interactions:2 interactions with chain A- Water bridges: A:D.86, A:D.86
PEG.5: 3 residues within 4Å:- Chain A: I.19, K.83
- Ligands: PEG.4
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.83
PEG.7: 1 residues within 4Å:- Chain B: Y.136
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:Y.136
PEG.9: 4 residues within 4Å:- Chain C: T.112
- Chain F: L.44, T.112, T.114
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:T.112, C:T.112
- Water bridges: C:T.112
PEG.14: 3 residues within 4Å:- Chain E: N.38, S.84, D.85
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:S.84
PEG.17: 3 residues within 4Å:- Chain C: N.138
- Chain F: S.10, K.31
2 PLIP interactions:1 interactions with chain F, 1 interactions with chain C- Hydrogen bonds: F:K.31, C:N.138
PEG.18: 2 residues within 4Å:- Chain F: N.38
- Ligands: PEG.19
No protein-ligand interaction detected (PLIP)PEG.19: 4 residues within 4Å:- Chain F: N.38, S.84, D.85
- Ligands: PEG.18
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:N.38, F:D.85
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x S21: 4,4,4-trifluoro-1-(4-nitrophenyl)butane-1,3-dione(Non-covalent)
S21.12: 14 residues within 4Å:- Chain C: H.57, F.58, I.63, M.64, G.66, Q.69, W.103, K.105
- Chain D: H.22, E.71, F.93, L.94, F.95, F.150
9 PLIP interactions:4 interactions with chain D, 5 interactions with chain C- Hydrophobic interactions: D:L.94, D:F.95, C:I.63, C:W.103
- Hydrogen bonds: D:F.95, C:G.66
- Halogen bonds: D:E.71
- pi-Stacking: C:W.103, C:W.103
S21.16: 16 residues within 4Å:- Chain E: H.57, I.63, M.64, P.65, G.66, Q.69, P.106, V.107
- Chain F: H.22, E.71, A.74, Q.75, F.93, L.94, F.95, F.150
6 PLIP interactions:2 interactions with chain E, 4 interactions with chain F- Hydrophobic interactions: E:I.63, F:L.94, F:F.95
- Hydrogen bonds: E:G.66, F:F.95
- Halogen bonds: F:Q.75
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maity, K. et al., Structural basis for the functional and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Plasmodium falciparum. J.Struct.Biol. (2011)
- Release Date
- 2012-02-29
- Peptides
- Beta-hydroxyacyl-ACP dehydratase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 10 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x S21: 4,4,4-trifluoro-1-(4-nitrophenyl)butane-1,3-dione(Non-covalent)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maity, K. et al., Structural basis for the functional and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Plasmodium falciparum. J.Struct.Biol. (2011)
- Release Date
- 2012-02-29
- Peptides
- Beta-hydroxyacyl-ACP dehydratase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F