- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 3 residues within 4Å:- Chain A: H.22, E.71
- Chain B: H.57
Ligand excluded by PLIPCL.4: 4 residues within 4Å:- Chain A: H.57
- Chain B: H.22, E.71, F.93
Ligand excluded by PLIPCL.10: 3 residues within 4Å:- Chain C: H.22, E.71, F.93
Ligand excluded by PLIPCL.20: 4 residues within 4Å:- Chain E: H.22, E.71, F.93
- Chain F: H.57
Ligand excluded by PLIP- 10 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.3: 3 residues within 4Å:- Chain B: S.10, I.11, K.31
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.31
PEG.6: 3 residues within 4Å:- Chain C: E.14, R.23
- Chain F: P.59
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:E.14
PEG.7: 5 residues within 4Å:- Chain C: N.118, S.132, V.134, N.144, S.146
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:N.118, C:N.144
PEG.8: 7 residues within 4Å:- Chain C: K.17, K.18, L.20, P.21, R.23, N.91
- Chain D: Q.60
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: C:N.91, D:Q.60
PEG.9: 7 residues within 4Å:- Chain C: P.52, N.55
- Chain D: Y.24, P.25, P.52
- Chain F: Y.24
- Ligands: GOL.5
4 PLIP interactions:1 interactions with chain F, 1 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: F:Y.24, C:P.52, C:N.55
- Water bridges: A:N.55
PEG.13: 2 residues within 4Å:- Chain E: D.86, K.89
No protein-ligand interaction detected (PLIP)PEG.14: 4 residues within 4Å:- Chain B: N.55, P.59
- Chain E: K.17, R.23
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain E- Hydrogen bonds: B:N.55, E:K.17, E:R.23
PEG.15: 3 residues within 4Å:- Chain E: R.102
- Chain F: K.130, T.149
3 PLIP interactions:1 interactions with chain E, 2 interactions with chain F- Hydrogen bonds: E:R.102, F:K.130, F:T.149
PEG.18: 4 residues within 4Å:- Chain E: A.96, T.149
- Chain F: R.102, W.103
2 PLIP interactions:1 interactions with chain E, 1 interactions with chain F- Hydrogen bonds: E:T.149, F:W.103
PEG.19: 1 residues within 4Å:- Chain F: D.8
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:D.8
- 2 x S21: 4,4,4-trifluoro-1-(4-nitrophenyl)butane-1,3-dione(Non-covalent)
S21.12: 15 residues within 4Å:- Chain C: H.57, I.63, M.64, P.65, G.66, Q.69, W.103, K.105, P.106, V.107
- Chain D: H.22, E.71, F.93, L.94, F.95
8 PLIP interactions:3 interactions with chain D, 5 interactions with chain C- Hydrophobic interactions: D:L.94, D:F.95, C:I.63, C:W.103
- Hydrogen bonds: D:F.95, C:G.66
- Water bridges: C:W.103
- pi-Stacking: C:W.103
S21.17: 16 residues within 4Å:- Chain E: H.57, I.63, M.64, P.65, G.66, Q.69, W.103, P.106
- Chain F: H.22, E.71, A.74, Q.75, F.93, L.94, F.95, F.150
8 PLIP interactions:5 interactions with chain F, 3 interactions with chain E- Hydrophobic interactions: F:L.94, F:F.95, E:I.63
- Hydrogen bonds: F:F.95, F:F.95, E:G.66, E:V.67
- Halogen bonds: F:E.71
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maity, K. et al., Structural basis for the functional and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Plasmodium falciparum. J.Struct.Biol. (2011)
- Release Date
- 2012-02-29
- Peptides
- Beta-hydroxyacyl-ACP dehydratase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MB
NC
OD
PE
QF
R
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 10 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 2 x S21: 4,4,4-trifluoro-1-(4-nitrophenyl)butane-1,3-dione(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maity, K. et al., Structural basis for the functional and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Plasmodium falciparum. J.Struct.Biol. (2011)
- Release Date
- 2012-02-29
- Peptides
- Beta-hydroxyacyl-ACP dehydratase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MB
NC
OD
PE
QF
R