- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NOS: INOSINE(Non-covalent)
- 6 x ACT: ACETATE ION(Non-functional Binders)
ACT.2: 4 residues within 4Å:- Chain A: H.286, Q.287, T.291
- Ligands: ACT.3
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.287, A:T.291
- Salt bridges: A:R.244, A:H.286
ACT.3: 4 residues within 4Å:- Chain A: R.43, E.45, Q.287
- Ligands: ACT.2
No protein-ligand interaction detected (PLIP)ACT.4: 8 residues within 4Å:- Chain A: Q.113, P.248, T.249, G.250, C.251, G.252
- Chain B: N.34
- Ligands: NOS.1
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:G.250, A:C.251, A:G.252, B:N.34
- Water bridges: A:Q.113, A:D.253, B:N.34
ACT.5: 3 residues within 4Å:- Chain A: T.295, R.296, A.297
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.296, A:A.297
ACT.11: 4 residues within 4Å:- Chain B: V.240, R.302, T.305, A.306
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:R.302, B:T.305
- Salt bridges: B:R.302
ACT.12: 8 residues within 4Å:- Chain A: N.34
- Chain B: Q.113, P.248, T.249, G.250, C.251, G.252
- Ligands: NOS.10
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:G.250, B:C.251, B:G.252
- Water bridges: B:D.253
- 1 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)
- 5 x NA: SODIUM ION(Non-functional Binders)
NA.7: 6 residues within 4Å:- Chain A: I.183, E.184, L.185, A.186, R.213, V.214
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.184
NA.8: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)NA.9: 1 residues within 4Å:- Chain A: G.204
No protein-ligand interaction detected (PLIP)NA.13: 6 residues within 4Å:- Chain B: I.183, E.184, L.185, A.186, R.213, V.214
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:I.183
NA.14: 1 residues within 4Å:- Chain B: E.195
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:E.195
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yasutake, Y. et al., Structures of Burkholderia thailandensis nucleoside kinase: implications for the catalytic mechanism and nucleoside selectivity. Acta Crystallogr.,Sect.D (2011)
- Release Date
- 2011-11-02
- Peptides
- Ribokinase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NOS: INOSINE(Non-covalent)
- 6 x ACT: ACETATE ION(Non-functional Binders)
- 1 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)
- 5 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yasutake, Y. et al., Structures of Burkholderia thailandensis nucleoside kinase: implications for the catalytic mechanism and nucleoside selectivity. Acta Crystallogr.,Sect.D (2011)
- Release Date
- 2011-11-02
- Peptides
- Ribokinase, putative: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
F