- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x LYS: LYSINE(Non-covalent)
- 3 x MLI: MALONATE ION(Non-functional Binders)
MLI.5: 6 residues within 4Å:- Chain A: R.662, E.663, T.666, R.707, F.711, A.743
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:F.711
- Water bridges: A:R.662, A:R.662, A:R.662, A:R.707, A:R.707
- Salt bridges: A:R.662, A:R.662, A:R.707
MLI.6: 7 residues within 4Å:- Chain A: M.281, G.282, Y.296, R.804, R.846
- Ligands: GOL.12, GOL.13
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:Y.296
- Water bridges: A:R.846
- Salt bridges: A:K.295, A:R.804, A:R.804, A:R.846
MLI.7: 5 residues within 4Å:- Chain A: E.90, P.91, W.92, T.93, A.94
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:E.90
- Hydrogen bonds: A:E.90, A:T.93, A:T.93, A:A.94
- 9 x GOL: GLYCEROL(Non-functional Binders)
GOL.8: 7 residues within 4Å:- Chain A: A.552, L.553, W.567, L.575, D.587, A.588, S.591
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:L.553, A:D.587, A:S.591, A:S.591
GOL.9: 7 residues within 4Å:- Chain A: S.84, V.85, P.91, W.92, T.93, W.95
- Ligands: GOL.10
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.85, A:W.95
GOL.10: 5 residues within 4Å:- Chain A: L.82, V.83, S.84, W.95
- Ligands: GOL.9
1 PLIP interactions:1 interactions with chain A- Water bridges: A:E.97
GOL.11: 8 residues within 4Å:- Chain A: Y.681, R.702, Q.724, E.727, A.728, N.729, N.730, D.733
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:Y.681, A:R.702, A:R.702, A:N.729, A:D.733, A:D.733
- Water bridges: A:Q.724, A:N.729
GOL.12: 8 residues within 4Å:- Chain A: M.281, Y.397, T.398, L.399, Y.402, E.403
- Ligands: MLI.6, GOL.13
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.403
GOL.13: 9 residues within 4Å:- Chain A: G.282, Y.296, R.314, V.315, H.318, Y.402
- Ligands: LYS.4, MLI.6, GOL.12
7 PLIP interactions:6 interactions with chain A, 1 Ligand-Ligand interactions- Hydrogen bonds: A:G.282, A:Y.296, A:R.314, A:R.314, A:H.318
- Water bridges: A:A.283, K.4
GOL.14: 6 residues within 4Å:- Chain A: D.79, L.80, K.81, E.118, I.119, S.120
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.118, A:S.120
- Water bridges: A:L.80, A:S.120
GOL.15: 5 residues within 4Å:- Chain A: T.414, A.507, C.555, E.556, S.558
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.414, A:E.556
GOL.16: 6 residues within 4Å:- Chain A: F.725, A.728, A.734, Y.756, K.759, W.760
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:A.728, A:K.759, A:W.760
- Water bridges: A:F.725, A:H.726
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Structural basis for the unusual specificity of Escherichia coli aminopeptidase N. Biochemistry (2008)
- Release Date
- 2008-05-06
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x LYS: LYSINE(Non-covalent)
- 3 x MLI: MALONATE ION(Non-functional Binders)
- 9 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Structural basis for the unusual specificity of Escherichia coli aminopeptidase N. Biochemistry (2008)
- Release Date
- 2008-05-06
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A