- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.30 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x PHE: PHENYLALANINE(Non-covalent)
- 2 x MLI: MALONATE ION(Non-functional Binders)
MLI.5: 9 residues within 4Å:- Chain A: M.281, G.282, K.295, Y.296, R.804, R.846
- Ligands: GOL.8, GOL.9, GOL.12
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:Y.296
- Water bridges: A:Y.296
- Salt bridges: A:K.295, A:R.804, A:R.804, A:R.846
MLI.6: 8 residues within 4Å:- Chain A: A.552, L.553, L.563, W.567, S.584, D.587, S.591
- Ligands: GOL.7
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:W.567
- Hydrogen bonds: A:L.553, A:S.591
- Water bridges: A:F.557
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 10 residues within 4Å:- Chain A: A.552, L.553, W.567, L.572, L.575, S.584, D.587, A.588, S.591
- Ligands: MLI.6
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:L.553, A:S.584, A:A.588, A:S.591, A:S.591
GOL.8: 8 residues within 4Å:- Chain A: M.281, Y.397, T.398, L.399, E.403
- Ligands: MLI.5, GOL.9, GOL.12
1 PLIP interactions:1 interactions with chain A- Water bridges: A:R.846
GOL.9: 10 residues within 4Å:- Chain A: A.283, R.314, V.315, H.318, E.319, Y.402
- Ligands: PHE.4, MLI.5, GOL.8, GOL.12
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:A.283, A:E.319
- Water bridges: A:R.314, A:R.314, A:H.318
GOL.10: 6 residues within 4Å:- Chain A: S.84, V.85, W.92, T.93, W.95
- Ligands: GOL.11
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.85, A:V.85
GOL.11: 5 residues within 4Å:- Chain A: L.82, V.83, S.84, W.95
- Ligands: GOL.10
1 PLIP interactions:1 interactions with chain A- Water bridges: A:L.82
GOL.12: 9 residues within 4Å:- Chain A: M.281, G.282, K.295, Y.296, R.804, R.846
- Ligands: MLI.5, GOL.8, GOL.9
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:K.295, A:K.295, A:Y.296, A:R.804, A:R.804, A:R.846, A:R.846
- Water bridges: A:Y.296, A:R.314
GOL.13: 6 residues within 4Å:- Chain A: W.246, E.313, L.355, V.691, E.692, H.693
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.313, A:V.691
- Water bridges: A:N.253, A:H.693
GOL.14: 6 residues within 4Å:- Chain A: R.459, S.462, Q.463, Q.496, E.498, Q.500
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.462, A:Q.496, A:Q.500
- Water bridges: A:Q.496, A:E.498
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Structural basis for the unusual specificity of Escherichia coli aminopeptidase N. Biochemistry (2008)
- Release Date
- 2008-05-06
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.30 Å
- Oligo State
- monomer
- Ligands
- 1 x ZN: ZINC ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x PHE: PHENYLALANINE(Non-covalent)
- 2 x MLI: MALONATE ION(Non-functional Binders)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Addlagatta, A. et al., Structural basis for the unusual specificity of Escherichia coli aminopeptidase N. Biochemistry (2008)
- Release Date
- 2008-05-06
- Peptides
- Aminopeptidase N: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A