SMTL ID : 3b6u.2 (1 other biounit)

Crystal structure of the motor domain of human kinesin family member 3B in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.116 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.116, H2O.4, H2O.4, H2O.4, H2O.7

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 12 residues within 4Å: Chain A: R.28, R.30, P.31, Q.110, T.111, G.112, T.113, G.114, K.115, T.116, Y.117 Ligands: MG.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:R.28, A:G.112, A:T.113, A:T.113, A:G.114, A:K.115, A:T.116, A:Y.117 Water bridges: A:R.28, A:N.33, A:T.111, A:K.115, A:T.116, A:T.116, A:T.116 Salt bridges: A:K.115 pi-Stacking: A:Y.117, A:Y.117

3 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 3 residues within 4Å: Chain A: I.281, N.282, L.283 No protein-ligand interaction detected (PLIP) UNX.4: 1 residues within 4Å: Chain A: R.145 No protein-ligand interaction detected (PLIP) UNX.5: 2 residues within 4Å: Chain A: P.31, M.32 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, H. et al., Motor domain of human kinesin family member 3B in complex with ADP. To be Published

Release Date

2007-11-13

Peptides

Kinesin-like protein KIF3B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Kinesin-like protein KIF3B

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