SMTL ID : 3bd3.2 (2 other biounits)

Crystal structure of single domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.1: 8 residues within 4Å: Chain A: Y.37, A.39, Y.41, L.51, Y.54, W.55, K.94, S.96 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:K.94, A:K.94, A:S.96 Water bridges: A:L.38, A:S.96, A:S.96, A:S.96, A:Y.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, S.Y. et al., Crystal structure of single-domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals. Proteins (2008)

Release Date

2008-04-01

Peptides

catalytic antibody: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

catalytic antibody

Related Entries With Identical Sequence