- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.48 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x MG: MAGNESIUM ION(Non-covalent)
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
TPP.7: 16 residues within 4Å:- Chain A: D.79, V.85, H.86, F.87, L.200, H.221, S.245, D.246, E.296, W.339, H.341
- Chain B: N.155
- Ligands: MG.3, MG.4, MG.5, ADP.13
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:L.200, A:W.339
- Hydrogen bonds: A:S.245, A:E.296
- Water bridges: A:D.79, A:D.79, A:E.296, A:H.341
- Salt bridges: A:H.86, A:H.341
- pi-Stacking: A:W.339, A:W.339
TPP.14: 17 residues within 4Å:- Chain A: N.155
- Chain B: D.79, G.84, V.85, H.86, F.87, L.200, H.221, S.245, D.246, E.296, W.339, H.341
- Ligands: MG.6, ADP.8, MG.10, MG.11
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:L.200
- Hydrogen bonds: B:S.245, B:E.296
- Water bridges: B:Y.298, B:Y.298, B:Y.298, B:Y.298
- Salt bridges: B:H.86, B:H.341
- pi-Stacking: B:W.339, B:W.339
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.8: 22 residues within 4Å:- Chain A: I.120, L.122, Y.137, G.153, G.154, N.155, I.156
- Chain B: F.45, I.48, I.51, I.60, G.61, D.62, D.63, D.79, D.107, R.178
- Ligands: MG.6, MG.9, MG.11, MG.12, TPP.14
17 PLIP interactions:11 interactions with chain B, 6 interactions with chain A- Hydrogen bonds: B:G.61, B:D.62, B:D.62, B:D.63, A:Y.137, A:Y.137, A:G.154, A:N.155
- Water bridges: B:T.77, B:T.77, B:R.178, B:R.178, B:D.243, B:S.245, A:G.154, A:I.156
- Salt bridges: B:R.178
ADP.13: 22 residues within 4Å:- Chain A: F.45, I.48, I.51, I.60, G.61, D.62, D.63, D.79, D.107, R.178
- Chain B: I.120, L.122, Y.137, G.153, G.154, N.155, I.156
- Ligands: MG.1, MG.2, MG.3, MG.5, TPP.7
19 PLIP interactions:9 interactions with chain B, 10 interactions with chain A- Hydrogen bonds: B:Y.137, B:Y.137, B:G.154, B:N.155, A:G.61, A:D.62, A:D.62
- Water bridges: B:G.154, B:N.155, B:N.155, B:N.155, B:N.155, A:D.62, A:R.178, A:R.178, A:S.245, A:S.245, A:S.245
- Salt bridges: A:R.178
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McCulloch, K.M. et al., Structural studies of thiamin monophosphate kinase in complex with substrates and products. Biochemistry (2008)
- Release Date
- 2008-03-18
- Peptides
- Thiamine monophosphate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.48 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x MG: MAGNESIUM ION(Non-covalent)
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McCulloch, K.M. et al., Structural studies of thiamin monophosphate kinase in complex with substrates and products. Biochemistry (2008)
- Release Date
- 2008-03-18
- Peptides
- Thiamine monophosphate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B