SMTL ID : 3ca6.4 (3 other biounits)

Sambucus nigra agglutinin II (SNA-II)- tetragonal crystal form- complexed to Tn antigen

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.40 Å
Oligo State
homo-dimer
Ligands
4 x NAG- FUC- NAG: alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x A2G: 2-acetamido-2-deoxy-alpha-D-galactopyranose(Non-covalent)
8 x SO4: SULFATE ION(Non-functional Binders)
2 x ACT: ACETATE ION(Non-functional Binders)
2 x SER: SERINE(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Maveyraud, L. et al., Structural basis for sugar recognition, including the Tn carcinoma antigen, by the lectin SNA-II from Sambucus nigra. Proteins (2009)
Release Date
2008-11-25
Peptides
Agglutinin II: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A

Agglutinin II

Toggle Identical (AB)

Related Entries With Identical Sequence

3c9z.1 | 3ca0.1 | 3ca1.1 | 3ca3.1 | 3ca3.2 | 3ca3.3 | 3ca3.4 | 3ca3.5 | 3ca4.1 | 3ca5.1 | 3ca5.2 | 3ca5.3 | 3ca5.4 | 3ca6.1 | 3ca6.2 | 3ca6.3 | 3cah.1 | 3cah.2 | 3cah.3