SMTL ID : 3cjq.3 (2 other biounits)

Ribosomal protein L11 methyltransferase (PrmA) in complex with dimethylated ribosomal protein L11 in space group P212121

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 18 residues within 4Å: Chain A: F.99, G.100, T.107, D.126, L.127, G.128, T.129, G.130, L.134, D.149, I.150, D.151, G.174, S.175, N.191, L.192, L.196 Ligands: 2MM.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.128, A:G.128, A:I.150, A:S.175, A:S.175, A:N.191 Water bridges: A:T.129, A:N.191

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 1 residues within 4Å: Chain B: K.1 Ligand excluded by PLIP

1 x 2MM: N,N-dimethyl-L-methionine(Non-covalent)

2MM.3: 9 residues within 4Å: Chain A: T.106, N.191, L.192, Y.193, G.218, W.247 Chain B: K.1, K.2 Ligands: SAH.1 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.1, B:K.2 Hydrophobic interactions: A:Y.193, A:W.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Demirci, H. et al., Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase. Structure (2008)

Release Date

2008-05-20

Peptides

Ribosomal protein L11 methyltransferase: A
50S ribosomal protein L11: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Ribosomal protein L11 methyltransferase

50S ribosomal protein L11

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