- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 17 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
PG4.7: 15 residues within 4Å:- Chain A: F.115, T.148, W.149, E.150, R.298, L.301, T.308, L.311
- Chain B: F.115, T.148, W.149, R.298, L.301, N.302, T.308
9 PLIP interactions:4 interactions with chain B, 5 interactions with chain A- Hydrogen bonds: B:W.149, B:R.298, A:W.149, A:E.150, A:R.298
- Water bridges: B:R.298, B:N.302, A:R.298, A:N.302
PG4.24: 6 residues within 4Å:- Chain B: T.95, L.98, K.99, A.134, V.136, R.140
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.134
- Water bridges: B:R.140
- 14 x GOL: GLYCEROL(Non-functional Binders)
GOL.11: 4 residues within 4Å:- Chain A: K.20, G.23, T.24, H.25
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.23, A:T.24
- Water bridges: A:V.26
GOL.12: 7 residues within 4Å:- Chain A: M.86, D.87, L.90, D.110, R.112, K.123, I.322
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.112, A:K.123, A:K.123
- Water bridges: A:D.110, A:D.110
GOL.13: 5 residues within 4Å:- Chain A: H.79, E.83, D.110, R.112, L.113
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:H.79
- Water bridges: A:D.110
GOL.14: 4 residues within 4Å:- Chain A: H.228, G.229, Y.230, K.287
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.229, A:K.287
GOL.15: 7 residues within 4Å:- Chain A: D.29, N.47, K.144, F.191, A.237, S.238, T.255
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:T.45, A:T.45, A:N.47, A:K.144, A:S.238
- Water bridges: A:D.29, A:T.255
GOL.16: 2 residues within 4Å:- Chain A: E.282, E.283
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.283
GOL.17: 4 residues within 4Å:- Chain A: S.319, A.320, E.323
- Chain B: E.303
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:E.303
- Water bridges: A:A.320
GOL.27: 4 residues within 4Å:- Chain B: R.194, S.238, R.240
- Ligands: GOL.31
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.194, B:R.240, B:R.240
GOL.28: 7 residues within 4Å:- Chain B: M.86, D.87, L.90, D.110, R.112, K.123, I.322
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:D.87, B:D.87, B:R.112, B:K.123
- Water bridges: B:D.110
GOL.29: 6 residues within 4Å:- Chain B: N.84, D.87, K.122, K.123, H.126
- Ligands: EDO.19
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:N.84, B:D.87, B:K.122
- Water bridges: B:K.123, B:K.123
GOL.30: 4 residues within 4Å:- Chain B: E.159, N.184, V.185, T.186
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:E.159, B:V.185
- Water bridges: B:E.159
GOL.31: 8 residues within 4Å:- Chain B: D.29, N.47, K.144, F.191, A.237, S.238, T.255
- Ligands: GOL.27
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:T.45, B:N.47, B:K.144, B:S.238
- Water bridges: B:T.169, B:T.169, B:T.255
GOL.32: 5 residues within 4Å:- Chain B: H.79, E.83, D.110, R.112, L.113
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:H.79
- Water bridges: B:R.112, B:R.112
GOL.33: 5 residues within 4Å:- Chain B: L.125, I.128, K.138, H.162, I.164
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.138, B:K.138
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, H. et al., The crystal structure and identification of NQM1/YGR043C, a transaldolase from Saccharomyces cerevisiae. Proteins (2008)
- Release Date
- 2009-04-07
- Peptides
- Putative transaldolase YGR043C: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 17 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 14 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, H. et al., The crystal structure and identification of NQM1/YGR043C, a transaldolase from Saccharomyces cerevisiae. Proteins (2008)
- Release Date
- 2009-04-07
- Peptides
- Putative transaldolase YGR043C: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B