SMTL ID : 3cse.1 (1 other biounit)

Candida glabrata Dihydrofolate Reductase complexed with NADPH and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120B)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 28 residues within 4Å: Chain A: V.10, A.11, I.19, G.20, F.21, G.23, N.24, L.25, W.27, G.55, R.56, K.57, T.58, V.77, S.78, R.79, N.96, S.97, L.98, I.121, G.122, G.123, G.124, E.125, I.126, Y.127, Q.129 Ligands: N22.2 36 PLIP interactions: 36 interactions with chain A Hydrophobic interactions: A:L.25, A:T.58 Hydrogen bonds: A:A.11, A:I.19, A:F.21, A:G.23, A:G.23, A:G.55, A:R.56, A:R.56, A:K.57, A:T.58, A:T.58, A:R.79, A:R.79, A:S.80, A:L.98, A:G.123, A:G.124, A:E.125, A:E.125, A:E.125, A:I.126, A:Y.127, A:Q.129, A:Q.129 Water bridges: A:S.78, A:R.79, A:S.80, A:R.99, A:E.125, A:R.128, A:T.155 Salt bridges: A:R.56, A:K.57 pi-Cation interactions: A:R.79

1 x N22: 5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine(Non-covalent)

N22.2: 15 residues within 4Å: Chain A: I.9, V.10, A.11, L.25, E.32, M.33, F.36, S.61, I.62, P.63, L.69, I.121, Y.127, T.140 Ligands: NDP.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.25, A:F.36, A:F.36, A:I.62, A:I.62 Hydrogen bonds: A:I.9, A:T.140, A:T.140 Salt bridges: A:E.32 pi-Stacking: A:F.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, J. et al., Structure-guided development of efficacious antifungal agents targeting Candida glabrata dihydrofolate reductase. Chem.Biol. (2008)

Release Date

2008-11-25

Peptides

Dihydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dihydrofolate reductase

Related Entries With Identical Sequence