SMTL ID : 3cue.4 (3 other biounits)

Crystal structure of a TRAPP subassembly activating the Rab Ypt1p

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.70 Å

Oligo State

hetero-oligomer

Ligands

1 x PLM: PALMITIC ACID(Covalent)

PLM.1: 12 residues within 4Å: Chain E: L.67, I.68, C.80, T.86, V.89, L.90, A.94, F.95, F.98, L.144, L.148, S.151 6 PLIP interactions: 6 interactions with chain E Hydrophobic interactions: E:I.68, E:A.94, E:F.95, E:F.98, E:L.144, E:L.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cai, Y. et al., The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes. Cell(Cambridge,Mass.) (2008)

Release Date

2008-07-08

Peptides

Transport protein particle 23 kDa subunit: A
Transport protein particle 31 kDa subunit: B
Transport protein particle 18 kDa subunit: C
Transport protein particle 22 kDa subunit: DE
GTP-binding protein YPT1: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
S

B
T

C
U

D
V

E
W

F
X

Transport protein particle 23 kDa subunit

Transport protein particle 31 kDa subunit

Transport protein particle 18 kDa subunit

Transport protein particle 22 kDa subunit

GTP-binding protein YPT1

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