SMTL ID : 3cy4.1

Crystal Structure cation-dependent mannose 6-phosphate receptor at pH 7.4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN-MAN-MAN.1: 4 residues within 4Å: Chain A: R.79, N.81, E.82, Q.110 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.101, A:E.101, A:Q.110 NAG-NAG-MAN-MAN-MAN.2: 1 residues within 4Å: Chain B: N.81 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: E.133, R.135 Chain B: K.18 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Water bridges: A:E.133, A:R.135 Hydrogen bonds: B:K.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Olson, L.J. et al., Structural Insights into the Mechanism of pH-dependent Ligand Binding and Release by the Cation-dependent Mannose 6-Phosphate Receptor. J.Biol.Chem. (2008)

Release Date

2008-05-13

Peptides

Cation-dependent mannose-6-phosphate receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cation-dependent mannose-6-phosphate receptor

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