SMTL ID : 3d83.1

Crystal structure of P38 kinase in complex with a biphenyl amide inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x GK6: N-{4'-[(cyclopropylmethyl)carbamoyl]-6-methylbiphenyl-3-yl}-2-morpholin-4-ylpyridine-4-carboxamide(Non-covalent)

GK6.1: 21 residues within 4Å: Chain A: V.30, V.38, A.51, K.53, E.71, L.74, L.75, M.78, V.83, I.84, L.104, T.106, L.108, M.109, I.141, I.146, H.148, I.166, L.167, D.168, F.169 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.38, A:A.51, A:K.53, A:L.75, A:L.75, A:L.104, A:L.104, A:T.106, A:D.168, A:F.169 Hydrogen bonds: A:K.53, A:E.71, A:E.71, A:M.109, A:D.168 pi-Cation interactions: A:K.53

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: R.220, T.221 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.220, A:T.221 Water bridges: A:G.219, A:T.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Angell, R.M. et al., Biphenyl amide p38 kinase inhibitors 4: DFG-in and DFG-out binding modes. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-07-22

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

Related Entries With Identical Sequence