SMTL ID : 3dlj.1 (2 other biounits)

Crystal structure of human carnosine dipeptidase 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: D.143, E.177, E.178, H.456 Ligands: ZN.2, UNX.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.143, A:E.178, A:E.178, A:H.456 ZN.2: 8 residues within 4Å: Chain A: H.110, D.143, N.144, E.177, E.178, D.206 Ligands: ZN.1, UNX.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.110, A:D.143, A:D.206, A:D.206

9 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 5 residues within 4Å: Chain A: D.143, E.177, D.206 Ligands: ZN.1, ZN.2 No protein-ligand interaction detected (PLIP) UNX.4: 1 residues within 4Å: Chain A: R.354 No protein-ligand interaction detected (PLIP) UNX.5: 2 residues within 4Å: Chain A: H.239, T.341 No protein-ligand interaction detected (PLIP) UNX.6: 2 residues within 4Å: Chain A: D.335, E.336 No protein-ligand interaction detected (PLIP) UNX.7: 2 residues within 4Å: Chain A: V.45, R.47 No protein-ligand interaction detected (PLIP) UNX.8: 1 residues within 4Å: Chain A: R.47 No protein-ligand interaction detected (PLIP) UNX.9: 1 residues within 4Å: Chain A: D.235 No protein-ligand interaction detected (PLIP) UNX.10: 2 residues within 4Å: Chain A: A.252, A.256 No protein-ligand interaction detected (PLIP) UNX.11: 4 residues within 4Å: Chain A: L.247, H.248, E.249, A.252 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.12: 1 residues within 4Å: Chain A: R.303 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.303

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dobrovetsky, E. et al., Crystal structure of human carnosine dipeptidase 1. To be Published

Release Date

2008-08-19

Peptides

Beta-Ala-His dipeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-Ala-His dipeptidase

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