SMTL ID : 3dxl.1

Crystal structure of AeD7 from Aedes Aegypti

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: L.10, R.147, K.150, Y.274 Ligand excluded by PLIP

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.2: 8 residues within 4Å: Chain A: F.154, E.158, I.175, R.176, Y.178, D.265, E.268 Ligands: GOL.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.158, A:D.265, A:E.268, A:E.268 Water bridges: A:E.158

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: F.13, W.34, W.37, N.39, F.50, H.117 Ligands: GOL.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.34, A:N.39 Water bridges: A:W.34, A:W.37 GOL.4: 10 residues within 4Å: Chain A: W.37, V.54, T.58, L.60, Y.92, Y.113, H.117, S.124, F.128 Ligands: GOL.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.58, A:H.117, A:S.124 Water bridges: A:S.124 GOL.5: 9 residues within 4Å: Chain A: I.175, Y.178, F.186, H.189, T.190, V.193, Y.248, F.264 Ligands: TRS.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.175, A:T.190, A:Y.248 Water bridges: A:Y.178 GOL.6: 5 residues within 4Å: Chain A: E.8, F.11, I.12, R.57, R.198 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.8, A:R.57, A:R.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Calvo, E. et al., Multifunctionality and mechanism of ligand binding in a mosquito antiinflammatory protein. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-02-03

Peptides

Allergen Aed a 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Allergen Aed a 2

Related Entries With Identical Sequence