- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 2 residues within 4Å:- Chain B: R.15, K.17
2 PLIP interactions:2 interactions with chain B- Salt bridges: B:R.15, B:K.17
SO4.3: 4 residues within 4Å:- Chain B: Y.13, R.15, I.24, H.26
2 PLIP interactions:2 interactions with chain B- Salt bridges: B:R.15, B:H.26
SO4.4: 3 residues within 4Å:- Chain A: Q.78, R.383
- Chain B: K.32
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:Q.78
- Water bridges: A:R.383
- Salt bridges: A:R.383, B:K.32
SO4.12: 2 residues within 4Å:- Chain A: R.15, K.17
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:R.15, A:K.17
SO4.13: 4 residues within 4Å:- Chain A: Y.13, R.15, I.24, H.26
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.13
- Salt bridges: A:R.15, A:H.26
SO4.14: 3 residues within 4Å:- Chain A: K.32
- Chain B: Q.78, R.383
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:Q.78
- Water bridges: B:R.383
- Salt bridges: B:R.383, A:K.32
- 2 x AT6: N-[2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL]-4-CYANOBENZAMIDE(Non-covalent)
AT6.5: 12 residues within 4Å:- Chain A: Q.192, R.195, A.211, P.279, V.281, F.298, G.300, W.301, Y.302, E.306, R.317
- Ligands: HEM.6
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:P.279, A:V.281, A:F.298
- Hydrogen bonds: A:R.195, A:E.306, A:R.317
- Water bridges: A:R.195, A:Y.276, A:E.306, A:Q.316, A:Q.316
AT6.15: 12 residues within 4Å:- Chain B: Q.192, R.195, A.211, P.279, V.281, F.298, G.300, W.301, Y.302, E.306, R.317
- Ligands: HEM.16
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:P.279, B:V.281, B:F.298
- Hydrogen bonds: B:R.195, B:E.306, B:R.317
- Water bridges: B:R.195, B:Y.276, B:Q.316, B:Q.316
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.6: 20 residues within 4Å:- Chain A: W.123, A.126, R.128, C.129, I.130, G.131, L.138, S.171, F.298, N.299, G.300, W.301, M.303, E.306, W.392, Y.418, Y.420
- Ligands: AT6.5, H4B.7, EDO.10
18 PLIP interactions:18 interactions with chain A,- Hydrophobic interactions: A:W.123, A:W.123, A:W.123, A:A.126, A:L.138, A:F.298, A:F.298, A:F.298, A:F.298, A:W.301, A:E.306, A:W.392
- Water bridges: A:E.306, A:R.310, A:R.310, A:Y.420
- pi-Stacking: A:W.123
- Metal complexes: A:C.129
HEM.16: 20 residues within 4Å:- Chain B: W.123, A.126, R.128, C.129, I.130, G.131, L.138, S.171, F.298, N.299, G.300, W.301, M.303, E.306, W.392, Y.418, Y.420
- Ligands: AT6.15, H4B.17, EDO.20
18 PLIP interactions:18 interactions with chain B,- Hydrophobic interactions: B:W.123, B:W.123, B:W.123, B:A.126, B:L.138, B:F.298, B:F.298, B:F.298, B:F.298, B:W.301, B:E.306, B:W.392
- Hydrogen bonds: B:Y.420
- Water bridges: B:R.310, B:R.310, B:Y.420
- pi-Stacking: B:W.123
- Metal complexes: B:C.129
- 2 x H4B: 5,6,7,8-TETRAHYDROBIOPTERIN(Non-covalent)
H4B.7: 10 residues within 4Å:- Chain A: S.47, R.310, I.391, W.392
- Chain B: W.390, F.405, H.406, Q.407, E.408
- Ligands: HEM.6
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:R.310, A:W.392
- Water bridges: A:R.310, A:R.310, A:R.310
- pi-Stacking: A:W.392, A:W.392
- pi-Cation interactions: A:W.392, A:W.392
- Hydrophobic interactions: B:E.408
H4B.17: 10 residues within 4Å:- Chain A: W.390, F.405, H.406, Q.407, E.408
- Chain B: S.47, R.310, I.391, W.392
- Ligands: HEM.16
10 PLIP interactions:9 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:R.310, B:W.392
- Water bridges: B:R.310, B:R.310, B:R.310
- pi-Stacking: B:W.392, B:W.392
- pi-Cation interactions: B:W.392, B:W.392
- Hydrophobic interactions: A:E.408
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.8: 5 residues within 4Å:- Chain A: V.349, L.352, H.353, Q.356
- Chain B: A.336
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Water bridges: B:S.337
- Hydrogen bonds: A:Q.356, A:Q.356
EDO.9: 4 residues within 4Å:- Chain A: N.166, L.256, Q.358, V.360
4 PLIP interactions:4 interactions with chain A- Water bridges: A:N.166, A:N.166, A:Q.358, A:N.359
EDO.10: 7 residues within 4Å:- Chain A: G.131, I.133, Q.134, W.301, M.363, S.371
- Ligands: HEM.6
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:W.301, A:S.371, A:S.371
- Water bridges: A:I.133
EDO.18: 5 residues within 4Å:- Chain A: A.336
- Chain B: V.349, L.352, H.353, Q.356
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Water bridges: A:S.337
- Hydrogen bonds: B:Q.356, B:Q.356
EDO.19: 4 residues within 4Å:- Chain B: N.166, L.256, Q.358, V.360
4 PLIP interactions:4 interactions with chain B- Water bridges: B:N.166, B:N.166, B:Q.358, B:N.359
EDO.20: 7 residues within 4Å:- Chain B: G.131, I.133, Q.134, W.301, M.363, S.371
- Ligands: HEM.16
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:W.301, B:S.371, B:S.371
- Water bridges: B:I.133
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Garcin, E.D. et al., Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. (2008)
- Release Date
- 2008-10-07
- Peptides
- Nitric oxide synthase, inducible: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 2 x AT6: N-[2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL]-4-CYANOBENZAMIDE(Non-covalent)
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x H4B: 5,6,7,8-TETRAHYDROBIOPTERIN(Non-covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Garcin, E.D. et al., Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. (2008)
- Release Date
- 2008-10-07
- Peptides
- Nitric oxide synthase, inducible: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A