SMTL ID : 3e70.1

Structures and conformations in solution of the Signal Recognition Particle Receptor from the Archaeon Pyrococcus Furiosus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

monomer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 17 residues within 4Å: Chain A: F.137, N.138, G.139, S.140, G.141, K.142, T.143, T.144, K.148, T.276, K.277, D.279, G.302, V.303, G.304, Q.305 Ligands: MG.2 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:F.137, A:G.139, A:S.140, A:G.141, A:K.142, A:T.143, A:T.144, A:T.144, A:K.148, A:K.277, A:K.277, A:G.304 Water bridges: A:N.138, A:N.138, A:T.144, A:R.169, A:Q.305 Salt bridges: A:D.279 GDP.3: 7 residues within 4Å: Chain A: I.188, K.189, H.190, D.202, Q.205, H.206, A.209 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.189, A:H.206 Water bridges: A:K.189, A:K.189, A:D.202, A:D.202 Salt bridges: A:D.202

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: T.143, D.218 Ligands: GDP.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.143, H2O.1, H2O.2, H2O.2, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Egea, P.F. et al., Structures of the signal recognition particle receptor from the archaeon Pyrococcus furiosus: implications for the targeting step at the membrane. Plos One (2008)

Release Date

2008-11-18

Peptides

Signal recognition particle receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Signal recognition particle receptor

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