3edq.1 | SWISS-MODEL Template Library

SMTL ID : 3edq.1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

hetero-2-2-mer

Ligands

2 x ACE- LEU- ASP- GLU- SER- ASA: AC-LDESD-CHO peptide(Non-covalent)

ACE-LEU-ASP-GLU-SER-ASA.1:	19 residues within 4Å: Chain A: M.33, S.35, R.36, S.92, H.93, G.94, Q.133, C.135 Chain B: Y.29, S.30, W.31, R.32, N.33, S.34, W.39, E.73, S.74, F.75, F.77 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:H.93, A:G.94, A:Q.133, A:C.135, B:S.30 Salt bridges: A:R.36, B:R.32
ACE-LEU-ASP-GLU-SER-ASA.2:	18 residues within 4Å: Chain C: S.35, R.36, S.92, H.93, G.94, Q.133, C.135 Chain D: Y.29, S.30, W.31, R.32, N.33, S.34, W.39, E.73, S.74, F.75, F.77 6 PLIP interactions: 2 interactions with chain D, 4 interactions with chain C Hydrogen bonds: D:N.33, C:G.94, C:Q.133, C:C.135, D:S.30 Salt bridges: C:R.36, D:R.32

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Fu, G. et al., Structural basis for executioner caspase recognition of P5 position in substrates. Apoptosis (2008)

Release Date

2008-10-28

Peptides

Caspase-3: AC
Caspase-3: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D