SMTL ID : 3edx.2 (2 other biounits)

Crystal structure of the W215A/E217A mutant of murine thrombin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain B: R.36, E.82, K.104, F.257 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.36, B:K.104 SO4.2: 5 residues within 4Å: Chain B: H.87, R.89, R.98, L.246, W.249 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.89 Salt bridges: B:H.87, B:R.98 SO4.3: 4 residues within 4Å: Chain B: R.145, E.146, T.147, K.234 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.146, B:T.147 Salt bridges: B:R.145, B:K.234

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 1 residues within 4Å: Chain B: N.53 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.53, B:N.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gandhi, P.S. et al., Molecular Basis for the Kinetic Differences of the W215A/E217A Mutant of Human and Murine Thrombin. To be Published

Release Date

2009-07-07

Peptides

Thrombin light chain: A
Thrombin heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Thrombin light chain

Thrombin heavy chain

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