SMTL ID : 3edx.3 (2 other biounits)

Crystal structure of the W215A/E217A mutant of murine thrombin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: F.4 Chain B: D.122, K.123, K.247 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.123 Salt bridges: B:K.247 SO4.2: 4 residues within 4Å: Chain B: H.87, R.98, L.246, W.249 3 PLIP interactions: 3 interactions with chain B Water bridges: B:W.249 Salt bridges: B:H.87, B:R.98

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain B: P.48, N.53 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gandhi, P.S. et al., Molecular Basis for the Kinetic Differences of the W215A/E217A Mutant of Human and Murine Thrombin. To be Published

Release Date

2009-07-07

Peptides

Thrombin light chain: A
Thrombin heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Thrombin light chain

Thrombin heavy chain

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