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SMTL ID : 3efv.2
(2 other biounits)
Crystal Structure of a Putative Succinate-Semialdehyde Dehydrogenase from Salmonella typhimurium LT2 with bound NAD
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.90 Å
Oligo State
homo-dimer
Ligands
2 x
NAD
:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
(Non-covalent)
NAD.1:
28 residues within 4Å:
Chain A:
I.133
,
M.134
,
P.135
,
W.136
,
N.137
,
Q.142
,
R.145
,
K.160
,
H.161
,
A.162
,
P.163
,
N.193
,
V.196
,
T.211
,
G.212
,
S.213
,
A.216
,
A.219
,
I.220
,
E.234
,
L.235
,
G.236
,
C.268
,
R.312
,
E.365
,
F.367
,
L.393
,
F.431
18
PLIP interactions
:
18 interactions with chain A
Hydrophobic interactions:
A:T.211
Hydrogen bonds:
A:W.136
,
A:R.145
,
A:R.145
,
A:K.160
,
A:S.213
,
A:S.213
,
A:E.234
,
A:G.237
,
A:R.312
,
A:E.365
Water bridges:
A:K.160
,
A:N.193
,
A:S.213
,
A:V.214
,
A:Q.223
,
A:E.365
,
A:E.365
NAD.2:
28 residues within 4Å:
Chain B:
I.133
,
M.134
,
P.135
,
W.136
,
N.137
,
Q.142
,
R.145
,
K.160
,
H.161
,
A.162
,
P.163
,
N.193
,
V.196
,
T.211
,
G.212
,
S.213
,
A.216
,
A.219
,
I.220
,
E.234
,
L.235
,
G.236
,
G.237
,
C.268
,
E.365
,
F.367
,
L.393
,
F.431
19
PLIP interactions
:
19 interactions with chain B
Hydrophobic interactions:
B:T.211
Hydrogen bonds:
B:W.136
,
B:R.145
,
B:R.145
,
B:K.160
,
B:K.160
,
B:S.213
,
B:E.234
,
B:E.234
,
B:G.237
,
B:E.365
Water bridges:
B:N.137
,
B:N.193
,
B:N.193
,
B:Q.223
,
B:Q.223
,
B:Q.223
,
B:L.235
,
B:G.236
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Zheng, H. et al., Structure and activity of the NAD(P)(+) -dependent succinate semialdehyde dehydrogenase YneI from Salmonella typhimurium. Proteins (2013)
Release Date
2008-11-04
Peptides
Putative succinate-semialdehyde dehydrogenase:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
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Putative succinate-semialdehyde dehydrogenase
Related Entries With Identical Sequence
3efv.1
|
3efv.3
|
3etf.1
|
3etf.2
|
3etf.3
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