SMTL ID : 3epy.2 (1 other biounit)

Crystal Structure of human acyl-CoA binding domain 7 complexed with palmitoyl-Coa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-dimer

Ligands

2 x COA: COENZYME A(Non-covalent)

COA.1: 10 residues within 4Å: Chain A: A.12, V.15, R.16, L.30, Y.31, Y.34, K.35 Chain B: K.57, Y.76 Ligands: PLM.2 9 PLIP interactions: 6 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:R.16, A:Y.31, B:Y.76 Water bridges: A:R.16 Salt bridges: A:K.35, B:K.57, B:K.57 pi-Stacking: A:Y.34, A:Y.34 COA.3: 10 residues within 4Å: Chain A: K.57, Y.76 Chain B: A.12, V.15, R.16, L.30, Y.31, Y.34, K.35 Ligands: PLM.4 11 PLIP interactions: 5 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:R.16, B:Y.31, A:Y.76, A:Y.76 Salt bridges: B:K.35, A:K.57, A:K.57 pi-Stacking: B:Y.34, B:Y.34 Water bridges: A:K.57, A:K.57

2 x PLM: PALMITIC ACID(Non-covalent)

PLM.2: 6 residues within 4Å: Chain A: V.15, R.16, L.18, L.30 Chain B: K.57 Ligands: COA.1 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:V.15, A:L.18, A:L.18, A:L.30, B:K.57 PLM.4: 11 residues within 4Å: Chain A: K.57 Chain B: V.15, L.18, K.19, A.20, R.21, P.22, L.27, L.30, Y.31 Ligands: COA.3 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:V.15, B:L.27, B:L.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kavanagh, K.L. et al., Crystal Structure of human acyl-CoA binding domain 7 complexed with palmitoyl-Coa. To be Published

Release Date

2009-01-20

Peptides

Acyl-CoA-binding domain-containing protein 7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Acyl-CoA-binding domain-containing protein 7

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