SMTL ID : 3es8.5 (4 other biounits)

Crystal structure of divergent enolase from Oceanobacillus Iheyensis complexed with Mg and L-malate.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x LMR: (2S)-2-hydroxybutanedioic acid(Non-covalent)

LMR.1: 11 residues within 4Å: Chain A: R.15, D.42, H.45, Y.89, Y.90, F.135, Y.164, T.297, Q.298, R.385 Ligands: MG.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:R.385 Hydrogen bonds: A:Y.89, A:Y.90, A:T.297 Water bridges: A:R.162, A:R.162 Salt bridges: A:R.15, A:H.45, A:H.246, A:R.385 LMR.3: 11 residues within 4Å: Chain B: R.15, D.42, H.45, Y.89, Y.90, F.135, Y.164, T.297, Q.298, R.385 Ligands: MG.4 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:R.385 Hydrogen bonds: B:D.42, B:Y.90, B:Y.164, B:Y.164 Water bridges: B:Y.89, B:R.162, B:R.162 Salt bridges: B:R.15, B:H.45, B:H.45, B:H.246, B:R.385

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: D.42, H.45, T.297, R.385 Ligands: LMR.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.42, A:H.45, A:T.297, A:T.297 MG.4: 5 residues within 4Å: Chain B: D.42, H.45, T.297, R.385 Ligands: LMR.3 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.42, B:H.45, B:T.297, B:T.297

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rakus, J.F. et al., Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis . Biochemistry (2009)

Release Date

2008-10-21

Peptides

Muconate cycloisomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Muconate cycloisomerase

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