SMTL ID : 3ezv.1

CDK-2 with indazole inhibitor 9 bound at its active site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x EZV: 4-{3-[7-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl}aniline(Non-covalent)

EZV.1: 16 residues within 4Å: Chain A: I.12, A.33, K.35, V.66, F.82, E.83, F.84, L.85, H.86, Q.87, D.88, Q.133, L.136, A.146, D.147, F.148 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:K.35, A:V.66, A:F.82, A:L.136, A:A.146 Hydrogen bonds: A:E.83, A:L.85, A:D.147, A:F.148 Water bridges: A:F.148 Salt bridges: A:D.88 pi-Stacking: A:F.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Trujillo, J.I. et al., 2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: Design and synthesis of a potent and isoform selective PKC-zeta inhibitor. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-02-03

Peptides

Cell division protein kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division protein kinase 2

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